Ecommerce Bookkeeping Services Built for Shopify, Amazon, and DTC Brands

Orders are up. Profit’s unclear.
Your books can’t explain the gap - but we can.

“We were scaling - but somehow making less.”

You're Selling More Than Ever - But Making Less

The ads are running. Orders are up. You’re growing.

So why does it still feel like you’re losing?

You open QuickBooks, and nothing adds up.
Your P&L says you’re profitable - but your bank balance says otherwise.
And no one can give you a straight answer about where the money went.

You’re not broken.
You’re just running a real business on fake numbers.

“We finally had our biggest month ever - and somehow lost money.”

That’s what happens when your books weren’t built for ecommerce.
You can’t trust your numbers.
So you can’t trust your decisions.

That’s the risk.

Most Bookkeepers Don’t Understand Ecommerce

And most brands don’t realize that - until they’re deep in the cash crunch.

You delegate the books.
You assume your CPA or Bookkeeper is tracking everything.
You trust your payouts match your sales.

They don’t.

Here’s what we see inside account after account:

  • Payouts booked as gross revenue - no breakdown for fees, returns, chargebacks

  • COGS tracked “on average” - not by SKU, not by channel, not by timeframe

  • Amazon deposits posted to “income” - with no idea what’s inside

  • Inventory missing from the balance sheet entirely

  • QuickBooks filled with categories like “Other Expenses” and “Shipping?”

  • Bookkeepers reconciling bank balances - not reconciling reality

None of this is malicious.
But your margins won’t care.

How Ecommerce Brands Lose Money - Without Realizing It

Ecommerce Bookkeeping Services for Shopify, Amazon, and 7-Figure Brands

It doesn’t take a bad decision - just bad data at the wrong moment. And in ecommerce, bad data is the default.

Here’s how it happens:

  • A top-selling SKU is underwater - but you don’t see it until Q4

  • Platform fees eat 18% of every order - but never show up in your P&L

  • Discounts spike revenue - while profit quietly disappears

  • An inventory write-off wipes out your net income - with zero warning

  • A bookkeeper tags Amazon fees as “Shipping” -and no one notices

Profit Leaks Don’t Show Up Until It’s Too Late

You’re scaling - but so are the errors.
Margins erode quietly. Bad data compounds. And nobody tells you until Q4 blows up.

Every Hour You Spend in QuickBooks Is a Margin Leak

Your focus is growth. Ours is the numbers behind it.

Your books shouldn’t be a question mark.
And your financials shouldn’t need a translator.

At Accounting Atelier, we specialize in ecommerce bookkeeping- with Shopify, Amazon, and QuickBooks fully integrated into our process.

No catch-all categories.
No messy imports.
No last-minute tax scrambles.

Here’s What You Actually Get:

  • Platform-specific revenue mapping - Shopify, Amazon, Etsy, Stripe, PayPal

  • Accurate COGS tracking tied to real inventory - not just vendor bills

  • Channel-level profitability reports - so you know what’s worth scaling

  • QuickBooks built for ecommerce - structured, streamlined, and readable

  • Monthly financials that show what’s working - and what’s bleeding

  • Reconciliations that tie out to SKUs and deposits - not just balances

  • Proactive support - from real people who know ecommerce, not a support alias

In short?
While others reconcile your bank account, we reconcile reality.

And we don’t just cleanup the books - we cleanup the decisions they drive.

Why Ecommerce Brands Choose Accounting Atelier

Outsourced virtual bookkeeping services for small businesses and entrepreneurs.

Because revenue is meaningless if you can’t trust your numbers.

“Amy spotted issues we had missed for three years - we finally understand what’s actually profitable.”
— Founder, Shopify Beauty Brand

“No one tells you how messy Amazon bookkeeping is until you're drowning. She cleaned it all up.”
— Owner, FBA Toy Seller

“We used to rely on what was in the bank. Now we rely on our books.”
— DTC Home Goods Brand

Still with a bookkeeper who “mostly gets it”?

You don’t need to switch tomorrow.
But you do need to know where the risks are hiding.

Let’s start there.

What Ecommerce Brands Usually Ask Us

  • Not exclusively - but ecommerce is a core specialty. We’ve worked with multiple Shopify, Amazon, and DTC brands, and we’re actively becoming certified in key ecommerce tools like A2X. Our systems, processes, and reporting are built to support the complexity of ecommerce - from platform payouts to COGS tracking.

  • Yes. We deliver SKU-level visibility, real margin analysis, and accurate month-end financials - built specifically for ecommerce.

  • Yes - as well as Etsy, WooCommerce, Walmart Marketplace, and more.

  • Yes. We’re A2X certified and integrate with the right tools to cleanly map revenue into QuickBooks.

  • Every month - structured, accurate, and delivered between the 10th–15th.

  • Our monthly bookkeeping services are month-to-month after onboarding. Most clients stay long-term because they finally have the financial clarity they need - but there’s no lock-in or long-term obligation.

  • Yes. After reviewing your QuickBooks file and sales channels, we’ll send a custom proposal.